Proteas allrounder Wayne Parnell hit a valuable 32 and claimed three wickets in a low-scoring Royal London One Day Cup Match against Middlesex in Canterbury.
Parnell has recovered from a health scare and looks to be in fine form heading towards the ODI series against England and the Champions Trophy which kicks off in June.
Stokes will lead the XI in the absence of regular captain Joe Root, who will be on paternity leave.
The 22-year-old is bidding for a Test debut against England.
The West Indies all-rounder could only make five in their second intra-squad match.
The star all-rounder will take charge for the opening Test against the West Indies.
Holder was dismissed for only five off 13 balls.
All-rounder will step in next week with Root missing the match to attend the birth of his second child.
The all-rounder left home county Yorkshire earlier this month.